The precise detection and segmentation of cells in microscopic image sequences is an essential task in biomedical research, such as drug discovery and studying the development of tissues, organs, or entire organisms. However, the detection and segmentation of cells in phase contrast images with a halo and shade-off effects is still challenging. Lately, Mask Regional Convolutional Neural Network (Mask R-CNN) has been introduced for object detection and instance segmentation of natural images. This study investigates the efficacy of the Mask R-CNN to instantly detect and segment label-free

Pediatric septic shock is generally considered as a devastating clinical syndrome that can lead to tissue damage and organ failure due to the over exaggerated immune response to an infection. Therefore, in this paper, we attempted to early identify the clinical course of such disease with the aid of peripheral blood T-cells of 181 pediatric patients who admitted to Intensive Care Unit (ICU), Accordingly, 34 differential expressed genes have been identified as biological genetic biomarkers. Minimum redundancy and maximum relevance feature selection strategy has been proposed for the discovery

Taxonomic assignment is the core of targeted metagenomics approaches that aims to assign sequencing reads to their corresponding taxonomy. Sequence similarity searching and machine learning (ML) are two commonly used approaches for taxonomic assignment based on the 16S rRNA. Similarity based approaches require high computation resources, while ML approaches dont need these resources in prediction. The majority of these ML approaches depend on k-mer frequency rather than direct sequence, which leads to low accuracy on short reads as k-mer frequency doesnt consider k-mer position. Moreover

The coronavirus (COVID-2019) quickly spread throughout the world and came to be a pandemic. To avoid further spreading this epidemic and treat affected patients rapidly, it is important to recognize the positive cases as early as possible. In this paper, deep learning techniques are employed to detect COVID-19 from chest X-ray images quickly. The images of the two classes, COVID and No-findings are collected from three public datasets. The proposed approach consists of two phases; transfer learning and fine-tuning. Transfer learning is carried out by seven deep learning models: DenseNet

Pervasive healthcare environments provide an effective solution for monitoring the wellbeing of the elderly where the general trend of an increasingly ageing population has placed significant burdens on current healthcare systems. An important pervasive healthcare system functionality is patient motion analysis where gait information can be used to detect walking behavior abnormalities that may indicate the onset of adverse health problems, for quantifying post-operative recovery, and to observe the progression of neurodegenerative diseases. The development of accurate motion analysis models

Stimulated echo acquisition mode (STEAM) is a generic imaging technique that lies at the core of many magnetic resonance imaging (MRI) techniques such MRI tagging, displacement encoded MRI, black-blood cardiac imaging. Nevertheless, tissue deformation causes frequency shift of the MR signal and leads to severe signal attenuation. In this work, a maximum likelihood estimator for the signal amplitude is proposed and used to correct the image artifacts. Numerical simulation and real MR data are used to test and validate the proposed method. © 2011 IEEE.

In the last few years the gene expression microarray technology has become a central tool in the field of functional genomics in which the expression levels of thousands of genes in a biological sample are determined in a single experiment. Several clustering and biclustering methods have been introduced to analyze the gene expression data by identifying the similar patterns and grouping genes into subsets that share biological significance. However, it is not clear how the different methods compare with each other with respect to the biological relevance of the biclusters and clusters as well

Corrosion occurs in all sectors including oil pipelines, drinking water and sewerage in the majority of cases linked to corrosion of steel. Good corrosion management includes optimising corrosion control actions and minimising lifecycle corrosion costs whilst meeting environmental goals. The toxicity of commonly used synthetic inhibitors are the subject of recent legislations (REACH and PARCOM) have led to search on more eco-friendly corrosion inhibitors. Extensive research is conducted to assess the corrosion inhibition rate of diverse green inhibitors. However, it was not adequately

The aim of our study was to investigate the ability of Strain-Encoded magnetic resonance imaging (MRI) to detect cardiac allograft vasculopathy (CAV) in heart transplantation (HTx)-recipients. In consecutive subjects (n = 69), who underwent cardiac catheterization, MRI was performed for quantification of myocardial strain and perfusion reserve. Based on angiographic findings subjects were classified: group A including patients with normal vessels; group B, patients with stenosis

Lactic acid is used for the preparation of poly-lactic acid. The objective of this research was to produce lactic acid from agro-industrial wastes as cheap, renewable substrates, and also reduce the pollution burden on the environment. Sixteen bacterial isolates were isolated from agro-industrial wastes. The chemical hydrolysis of agro-industrial wastes was achieved with hydrochloric acid, sulfuric acid, and sodium hydroxide. The highest yield of lactic acid produced was identified using 16S rRNA. The optimum conditions for lactic acid production were determined. Calcium lactate, produced from